Jane Patrick continues to be the top agent with his team in CBI, and had to uncover murderers one after another, like the death of an 18 year old waitress, a floating body of a school girl, a wealthy investor dead, and two best friends, one dead the other alive.

Later on Jane faces the possibility of catching Red John, who killed his family in exchange for the innocence of Jared who was framed to killing his girlfriend.
| Episode No | Episode Name | Directed by | Air Date |
|---|---|---|---|
| Episode 24 | "Redemption" | Chris Long | 24-Sep-09 |
| Episode 25 | "The Scarlet Letter" | Charles Beeson | 1-Oct-09 |
| Episode 26 | "Red Badge" | Eric Laneuville | 8-Oct-09 |
| Episode 27 | "Red Menace" | Norberto Barba | 15-Oct-09 |
| Episode 28 | "Red Scare" | Lesli Linka Glatter | 29-Oct-09 |
| Episode 29 | "Black Gold and Red Blood" | Rod Hardy | 5-Nov-09 |
| Episode 30 | "Red Bulls" | David Barrett | 12-Nov-09 |
| Episode 31 | "His Red Right Hand" | Chris Long | 19-Nov-09 |
| Episode 32 | "A Price Above Rubies" | Charles Beeson | 10-Dec-09 |
| Episode 33 | "Throwing Fire" | Martha Mitchell | 17-Dec-09 |
| Episode 34 | "Rose-Colored Glasses" | Dan Lerner | 14-Jan-10 |
| Episode 35 | "Bleeding Heart" | Norberto Barba | 21-Jan-10 |
| Episode 36 | "Redline" | Bill D'Elia | 4-Feb-10 |
| Episode 37 | "Blood In, Blood Out" | John Polson | 11-Feb-10 |
| Episode 38 | "Red Herring" | Eric Laneuville | 4-Mar-10 |
| Episode 39 | "Code Red" | John Showalter | 11-Mar-10 |
| Episode 40 | "The Red Box" | Chris Long | 1-Apr-10 |
| Episode 41 | "Aingavite" | Stephen Gyllenhaal | 8-Apr-10 |
| Episode 42 | "Blood Money" | Adam Kane | 22-Apr-10 |
| Episode 43 | "Red All Over" | Roxann Dawson | 29-Apr-10 |
| Episode 44 | "18-5-4" | Charles Beeson | 6-May-10 |
| Episode 45 | "Red Letter" | John Showalter | 13-May-10 |
| Episode 46 | "Red Sky in the Morning" | Chris Long | 20-May-10 |

